Cubecart will not update to newest version, Error log included

[fixingsfactory]

Hi All,

My Cubecart is badgering me to upgrade to the most recent version but when i try it just says failed.
I don't know how to manual upgrade and fear i may mess up the store and we have only just started getting repeat customers.
The error log is below:

### START UPGRADE LOG - (27 Mar 2018 - 09:17:28) ###
admin_hT3E3j/skins/default/js/plugins/jquery.colorbox.min.js - Content after extract doesn't match source
admin_hT3E3j/skins/default/js/plugins/jquery.multifile.min.js - Content after extract doesn't match source
admin_hT3E3j/skins/default/js/styles/jquery.chosen.min.css - Content after extract doesn't match source
admin_hT3E3j/skins/default/js/admin.js - Content after extract doesn't match source
admin_hT3E3j/skins/default/styles/layout.css - Content after extract doesn't match source
admin_hT3E3j/skins/default/styles/print.css - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/categories.index.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/products.index.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/products.coupons.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/main.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/dashboard.index.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/statistics.emaillog.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/settings.hooks.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/orders.index.php - Content after extract doesn't match source
admin_hT3E3j/skins/default/templates/settings.language.php - Content after extract doesn't match source
admin_hT3E3j/sources/settings.language.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/customers.email.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/element.navigation.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/settings.index.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/maintenance.index.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/settings.tax.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/products.assign.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/products.index.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/customers.index.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/orders.index.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/settings.admins.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/products.reviews.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/settings.hooks.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/products.coupons.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/dashboard.index.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/customers.subscribers.inc.php - Content after extract doesn't match source
admin_hT3E3j/sources/statistics.emaillog.inc.php - Content after extract doesn't match source
admin.php - Missing but expected after extract
classes/catalogue.class.php - Content after extract doesn't match source
classes/user.class.php - Content after extract doesn't match source
classes/hookloader.class.php - Content after extract doesn't match source
classes/gui.class.php - Content after extract doesn't match source
classes/order.class.php - Content after extract doesn't match source
classes/tax.class.php - Content after extract doesn't match source
classes/cart.class.php - Content after extract doesn't match source
classes/sanitize.class.php - Content after extract doesn't match source
classes/cubecart.class.php - Content after extract doesn't match source
classes/mailer.class.php - Content after extract doesn't match source
classes/language.class.php - Content after extract doesn't match source
classes/filemanager.class.php - Content after extract doesn't match source
classes/ajax.class.php - Content after extract doesn't match source
controllers/controller.admin.session.true.inc.php - Content after extract doesn't match source
includes/functions.inc.php - Content after extract doesn't match source
ini.inc.php - Content after extract doesn't match source
js/plugins/jquery.colorbox-min.js - Content after extract doesn't match source
js/common.js - Content after extract doesn't match source
language/en-GB.xml - Content after extract doesn't match source
language/definitions.xml - Content after extract doesn't match source
modules/plugins/hooks.xml - Content after extract doesn't match source
setup/ - Missing but expected after extract
setup/info.php - Missing but expected after extract
setup/index.php - Missing but expected after extract
setup/images/ - Missing but expected after extract
setup/images/upgrade.gif - Missing but expected after extract
setup/images/progress-back.png - Missing but expected after extract
setup/images/progress-fill.png - Missing but expected after extract
setup/images/loading.gif - Missing but expected after extract
setup/images/install.gif - Missing but expected after extract
setup/images/cubecart-logo.png - Missing but expected after extract
setup/images/alert-overlay.png - Missing but expected after extract
setup/js/ - Missing but expected after extract
setup/js/install.js - Missing but expected after extract
setup/setup.install.php - Missing but expected after extract
setup/styles/ - Missing but expected after extract
setup/styles/style.css - Missing but expected after extract
setup/scripts/ - Missing but expected after extract
setup/scripts/upgrade/ - Missing but expected after extract
setup/scripts/upgrade/6.0.2.php - Missing but expected after extract
setup/scripts/upgrade/5.1.2.php - Missing but expected after extract
setup/scripts/upgrade/5.0.0b2.php - Missing but expected after extract
setup/scripts/upgrade/5.1.1.php - Missing but expected after extract
setup/scripts/upgrade/5.0.0b1.php - Missing but expected after extract
setup/scripts/upgrade/5.2.4.php - Missing but expected after extract
setup/scripts/upgrade/5.2.5.php - Missing but expected after extract
setup/scripts/upgrade/5.2.2.php - Missing but expected after extract
setup/scripts/upgrade/6.1.0.php - Missing but expected after extract
setup/scripts/upgrade/5.2.0.php - Missing but expected after extract
setup/scripts/upgrade/5.0.9.php - Missing but expected after extract
setup/scripts/upgrade/6.0.11.php - Missing but expected after extract
setup/scripts/upgrade/6.0.12.php - Missing but expected after extract
setup/db/ - Missing but expected after extract
setup/db/upgrade/ - Missing but expected after extract
setup/db/upgrade/6.0.11.sql - Missing but expected after extract
setup/db/upgrade/6.1.9.sql - Missing but expected after extract
setup/db/upgrade/5.0.9.sql - Missing but expected after extract
setup/db/upgrade/5.0.8.sql - Missing but expected after extract
setup/db/upgrade/6.0.12.sql - Missing but expected after extract
setup/db/upgrade/5.2.9.sql - Missing but expected after extract
setup/db/upgrade/4.3.9.sql - Missing but expected after extract
setup/db/upgrade/6.0.9.sql - Missing but expected after extract
setup/db/upgrade/4.1.0.sql - Missing but expected after extract
setup/db/upgrade/6.0.5.sql - Missing but expected after extract
setup/db/upgrade/5.1.5.sql - Missing but expected after extract
setup/db/upgrade/5.0.0b5.sql - Missing but expected after extract
setup/db/upgrade/6.1.14.sql - Missing but expected after extract
setup/db/upgrade/5.0.0b4.sql - Missing but expected after extract
setup/db/upgrade/5.1.4.sql - Missing but expected after extract
setup/db/upgrade/4.1.1.sql - Missing but expected after extract
setup/db/upgrade/6.0.6.sql - Missing but expected after extract
setup/db/upgrade/4.3.1.sql - Missing but expected after extract
setup/db/upgrade/5.0.0b6.sql - Missing but expected after extract
setup/db/upgrade/5.2.14.sql - Missing but expected after extract
setup/db/upgrade/5.0.0b7.sql - Missing but expected after extract
setup/db/upgrade/4.3.0.sql - Missing but expected after extract
setup/db/upgrade/6.0.7.sql - Missing but expected after extract
setup/db/upgrade/6.0.3.sql - Missing but expected after extract
setup/db/upgrade/5.1.3.sql - Missing but expected after extract
setup/db/upgrade/6.1.13.sql - Missing but expected after extract
setup/db/upgrade/5.0.0b3.sql - Missing but expected after extract
setup/db/upgrade/5.0.0b2.sql - Missing but expected after extract
setup/db/upgrade/5.1.2.sql - Missing but expected after extract
setup/db/upgrade/6.0.2.sql - Missing but expected after extract
setup/db/upgrade/6.0.0.sql - Missing but expected after extract
setup/db/upgrade/5.1.0.sql - Missing but expected after extract
setup/db/upgrade/4.3.7.sql - Missing but expected after extract
setup/db/upgrade/5.2.13.sql - Missing but expected after extract
setup/db/upgrade/5.0.0b1.sql - Missing but expected after extract
setup/db/upgrade/6.1.11.sql - Missing but expected after extract
setup/db/upgrade/4.3.6.sql - Missing but expected after extract
setup/db/upgrade/5.1.1.sql - Missing but expected after extract
setup/db/upgrade/6.1.6.sql - Missing but expected after extract
setup/db/upgrade/5.0.6.sql - Missing but expected after extract
setup/db/upgrade/4.0.3.sql - Missing but expected after extract
setup/db/upgrade/5.2.5.sql - Missing but expected after extract
setup/db/upgrade/5.0.7.sql - Missing but expected after extract
setup/db/upgrade/4.2.0.sql - Missing but expected after extract
setup/db/upgrade/6.1.7.sql - Missing but expected after extract
setup/db/upgrade/6.1.5.sql - Missing but expected after extract
setup/db/upgrade/5.0.5.sql - Missing but expected after extract
setup/db/upgrade/4.0.0.sql - Missing but expected after extract
setup/db/upgrade/5.2.6.sql - Missing but expected after extract
setup/db/upgrade/4.2.3.sql - Missing but expected after extract
setup/db/upgrade/5.0.4.sql - Missing but expected after extract
setup/db/upgrade/6.1.4.sql - Missing but expected after extract
setup/db/upgrade/4.4.5.sql - Missing but expected after extract
setup/db/upgrade/6.1.0.sql - Missing but expected after extract
setup/db/upgrade/5.2.2.sql - Missing but expected after extract
setup/db/upgrade/5.2.3.sql - Missing but expected after extract
setup/db/upgrade/5.0.1.sql - Missing but expected after extract
setup/db/upgrade/5.0.3.sql - Missing but expected after extract
setup/db/upgrade/5.2.1.sql - Missing but expected after extract
setup/db/upgrade/5.2.0.sql - Missing but expected after extract
setup/db/upgrade/5.0.2.sql - Missing but expected after extract
setup/db/upgrade/6.1.2.sql - Missing but expected after extract
setup/db/install/ - Missing but expected after extract
setup/db/install/structure.sql - Missing but expected after extract
setup/db/install/data.sql - Missing but expected after extract
setup/db/install/email.sql - Missing but expected after extract
setup/db/install/table_drop.sql - Missing but expected after extract
setup/db/install/examples.sql - Missing but expected after extract
setup/skin.install.php - Missing but expected after extract
setup/setup.upgrade.php - Missing but expected after extract
setup/data/ - Missing but expected after extract
setup/data/eurofxref-daily.xml - Missing but expected after extract
skins/foundation/ - Missing but expected after extract
skins/foundation/css/ - Missing but expected after extract
skins/foundation/css/[email protected] - Missing but expected after extract
skins/foundation/css/cubecart.common.css - Missing but expected after extract
skins/foundation/css/jquery.bxslider.css - Missing but expected after extract
skins/foundation/css/cubecart.default.css - Missing but expected after extract
skins/foundation/css/cubecart.helpers.css - Missing but expected after extract
skins/foundation/css/cubecart.print.css - Missing but expected after extract
skins/foundation/css/chosen-sprite.png - Missing but expected after extract
skins/foundation/css/jquery.chosen.min.css - Missing but expected after extract
skins/foundation/css/normalize.css - Missing but expected after extract
skins/foundation/css/cubecart.css - Missing but expected after extract
skins/foundation/css/foundation.css - Missing but expected after extract
skins/foundation/images/ - Missing but expected after extract
skins/foundation/images/star_off.png - Missing but expected after extract
skins/foundation/images/delete.gif - Missing but expected after extract
skins/foundation/images/sprite_flags.png - Missing but expected after extract
skins/foundation/images/star.gif - Missing but expected after extract
skins/foundation/images/default/ - Missing but expected after extract
skins/foundation/images/default/logo/ - Missing but expected after extract
skins/foundation/images/default/logo/default.png - Missing but expected after extract
skins/foundation/images/star_half.png - Missing but expected after extract
skins/foundation/images/examples/ - Missing but expected after extract
skins/foundation/images/examples/slide3.jpg - Missing but expected after extract
skins/foundation/images/examples/slide2.jpg - Missing but expected after extract
skins/foundation/images/examples/slide1.jpg - Missing but expected after extract
skins/foundation/images/bxslider/ - Missing but expected after extract
skins/foundation/images/bxslider/bx_loader.gif - Missing but expected after extract
skins/foundation/images/bxslider/controls.png - Missing but expected after extract
skins/foundation/images/star.png - Missing but expected after extract
skins/foundation/images/noimage.png - Missing but expected after extract
skins/foundation/images/icon-sprites.svg - Missing but expected after extract
skins/foundation/js/ - Missing but expected after extract
skins/foundation/js/2.cubecart.js - Missing but expected after extract
skins/foundation/js/1.foundation.min.js - Missing but expected after extract
skins/foundation/js/readme.md - Missing but expected after extract
skins/foundation/js/3.cubecart.validate.js - Missing but expected after extract
skins/foundation/js/vendor/ - Missing but expected after extract
skins/foundation/js/vendor/jquery.validate.min.js - Missing but expected after extract
skins/foundation/js/vendor/jquery.bxslider.min.js - Missing but expected after extract
skins/foundation/js/vendor/modernizr.min.js - Missing but expected after extract
skins/foundation/js/vendor/jquery.cookie.min.js - Missing but expected after extract
skins/foundation/js/vendor/jquery.chosen.min.js - Missing but expected after extract
skins/foundation/js/vendor/jquery.rating.min.js - Missing but expected after extract
skins/foundation/js/vendor/jquery.js - Missing but expected after extract
skins/foundation/config.xml - Missing but expected after extract
skins/foundation/templates/ - Missing but expected after extract
skins/foundation/templates/ccpower.php - Missing but expected after extract
skins/foundation/templates/box.skins.php - Missing but expected after extract
skins/foundation/templates/content.gateway.php - Missing but expected after extract
skins/foundation/templates/box.featured.php - Missing but expected after extract
skins/foundation/templates/box.progress.php - Missing but expected after extract
skins/foundation/templates/content.certificates.php - Missing but expected after extract
skins/foundation/templates/element.breadcrumb.php - Missing but expected after extract
skins/foundation/templates/element.social.php - Missing but expected after extract
skins/foundation/templates/content.addressbook.php - Missing but expected after extract
skins/foundation/templates/content.recaptcha.php - Missing but expected after extract
skins/foundation/templates/content.homepage.php - Missing but expected after extract
skins/foundation/templates/box.search.php - Missing but expected after extract
skins/foundation/templates/box.eu_cookie.php - Missing but expected after extract
skins/foundation/templates/box.documents.php - Missing but expected after extract
skins/foundation/templates/main.php - Missing but expected after extract
skins/foundation/templates/box.off_canvas.left.php - Missing but expected after extract
skins/foundation/templates/element.product.options.php - Missing but expected after extract
skins/foundation/templates/element.recaptcha.invisible.php - Missing but expected after extract
skins/foundation/templates/element.product_reviews.php - Missing but expected after extract
skins/foundation/templates/element.product.review_score.php - Missing but expected after extract
skins/foundation/templates/box.sale_items.php - Missing but expected after extract
skins/foundation/templates/element.google_analytics.php - Missing but expected after extract
skins/foundation/templates/box.errors.php - Missing but expected after extract
skins/foundation/templates/content.checkout.small.php - Missing but expected after extract
skins/foundation/templates/content.newsletter.php - Missing but expected after extract
skins/foundation/templates/element.paginate.php - Missing but expected after extract
skins/foundation/templates/content.downloads.php - Missing but expected after extract
skins/foundation/templates/box.newsletter.php - Missing but expected after extract
skins/foundation/templates/element.product.horizontal_gallery.php - Missing but expected after extract
skins/foundation/templates/box.session.php - Missing but expected after extract
skins/foundation/templates/element.product.vertical_gallery.php - Missing but expected after extract
skins/foundation/templates/content.search.php - Missing but expected after extract
skins/foundation/templates/box.off_canvas.right.php - Missing but expected after extract
skins/foundation/templates/element.search.manufacturers.select.chosen.php - Missing but expected after extract
skins/foundation/templates/content.profile.php - Missing but expected after extract
skins/foundation/templates/content.checkout.medium-up.php - Missing but expected after extract
skins/foundation/templates/content.404.php - Missing but expected after extract
skins/foundation/templates/content.register.php - Missing but expected after extract
skins/foundation/templates/element.markup.json-ld.php - Missing but expected after extract
skins/foundation/templates/box.basket.content.php - Missing but expected after extract
skins/foundation/templates/content.login.php - Missing but expected after extract
skins/foundation/templates/box.currency.php - Missing but expected after extract
skins/foundation/templates/element.navigation_tree.php - Missing but expected after extract
skins/foundation/templates/box.language.php - Missing but expected after extract
skins/foundation/templates/content.account.php - Missing but expected after extract
skins/foundation/templates/content.receipt.php - Missing but expected after extract
skins/foundation/templates/element.search.manufacturers.checkbox.grid.php - Missing but expected after extract
skins/foundation/templates/content.checkout.php - Missing but expected after extract
skins/foundation/templates/content.contact.php - Missing but expected after extract
skins/foundation/templates/box.navigation.php - Missing but expected after extract
skins/foundation/templates/element.product.call_to_action.php - Missing but expected after extract
skins/foundation/templates/content.category.php - Missing but expected after extract
skins/foundation/templates/content.document.php - Missing but expected after extract
skins/foundation/templates/content.recovery.php - Missing but expected after extract
skins/foundation/templates/element.search.manufacturers.checkbox.table.php - Missing but expected after extract
skins/foundation/templates/box.basket.php - Missing but expected after extract
skins/foundation/templates/box.popular.php - Missing but expected after extract
skins/foundation/templates/content.recaptcha.head.php - Missing but expected after extract
skins/foundation/templates/print.receipt.php - Missing but expected after extract
skins/foundation/templates/main.checkout.php - Missing but expected after extract
skins/foundation/templates/content.checkout.confirm.php - Missing but expected after extract
skins/foundation/templates/content.orders.php - Missing but expected after extract
skins/foundation/templates/content.recover.php - Missing but expected after extract
skins/foundation/templates/.htaccess - Missing but expected after extract
skins/foundation/templates/content.product.php - Missing but expected after extract
--
Errors were found which may indicate that the source archive has not been extracted successfully.
It is recommended that a manual upgrade is performed.
### END RESTORE LOG ###

 

[Al Brookbanks]

Quote

It is recommended that a manual upgrade is performed.

Instructions here. Annoying I know and hopefully after manual upgrade it will work for future updates.

[fixingsfactory]

Will this procedure ask me if i want to upgrade? It worries me that it will just perform a new install and wipe me out

[Al Brookbanks]

Those instructions are for upgrading.

[fixingsfactory]

Ah right ok, well i have performed a full backup in admin, and i am now performing a site mirror download to my computer with the hopes i will need neither.

Thanks,

Adrian.

 

[havenswift-hosting]

A manual upgrade will always work and is the method I always use for all sites - if you are getting these errors then the upgrade via the admin upgrade option will always fail.  This problem seemed to start after switching to the "new" unzip function a while back.  Interestingly, WordPress websites on the same servers where I have seen these failures are able to upgrade using their built in utility without any issues